LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-199a-5p


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-199a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
248781-248805
0.018
0
8mer
28401-28424
0.010
1
9mer
3037-3058
0.007
1
7mer
75549-75573
0.007
1
7mer
74897-74917
0.006
11
7mer
56365-56385
0.005
1
7mer
107538-107553
0.004
1
7mer
12920-12939
0.004
5
8mer
107040-107065
0.004
2
7mer
48866-48886
0.004
3
8mer
186676-186699
0.004
1
8mer
233542-233556
0.004
1
7mer
68571-68585
0.004
1
7mer
20088-20110
0.003
3
7mer
82414-82430
0.003
0
6mer
254604-254622
0.003
7
7mer
4680-4696
0.003
1
8mer
114718-114744
0.003
1
7mer
227769-227796
0.003
2
7mer
228437-228443
0.003
1
7mer
102587-102611
0.003
2
7mer
23701-23724
0.003
0
8mer
160156-160170
0.003
1
7mer
118692-118712
0.003
1
7mer
219293-219311
0.003
0
7mer
159658-159680
0.003
1
7mer
56873-56888
0.003
5
7mer
97374-97396
0.003
1
6mer
466-481
0.003
0
7mer
28114-28125
0.002
0
6mer
147542-147565
0.002
4
7mer
78072-78090
0.002
0
6mer
31601-31622
0.002
5
7mer
264983-265001
0.002
2
6mer
113689-113715
0.002
2
6mer
219792-219818
0.002
4
6mer
160585-160598
0.002
3
6mer
208882-208906
0.002
1
6mer
52735-52749
0.002
0
6mer
33597-33608
0.002
3
7mer
1610-1635
0.002
3
6mer
126244-126259
0.002
0
7mer
142497-142512
0.002
4
6mer
26009-26035
0.002
2
7mer
46936-46948
0.002
1
6mer
27012-27025
0.002
3
6mer
55857-55877
0.002
1
6mer
78504-78527
0.002
Not Conserved
7mer
228181-228203
0.002
1
7mer
180965-180984
0.002
1
7mer
30217-30228
0.002
1
6mer
1488-1512
0.002
0
7mer
47849-47866
0.002
1
6mer
70435-70452
0.002
1
6mer
125732-125759
0.002
3
6mer
165186-165204
0.002
1
6mer
244215-244230
0.002
0
6mer
243221-243233
0.002
0
7mer
221264-221279
0.002
1
6mer
163659-163670
0.002
3
6mer
107169-107187
0.001
1
6mer
83663-83677
0.001
1
6mer
41824-41834
0.001
1
6mer
79111-79134
0.001
2
6mer
152108-152126
0.001
0
6mer
92252-92273
0.001
0
6mer
124375-124390
0.001
4
6mer
144832-144858
0.001
1
6mer
43317-43332
0.001
1
6mer
43681-43685
0.001
0
6mer
9654-9658
0.001
1
6mer
137672-137680
0.001
0
6mer
136477-136495
0.001
0
6mer
111641-111659
0.001
0
6mer
196077-196096
0.001
1
6mer
137424-137434
0.001
0
6mer
193735-193756
0.001
0
6mer
150280-150293
0.001
3
6mer
241898-241924
0.001
0
6mer
122083-122095
0.001
1
6mer
84133-84148
0.001
0
6mer
179981-180003
0.001
1
6mer
139008-139016
0.001
2
6mer
53246-53270
0.001
1
7mer
215205-215228
0.001
1
6mer
98809-98825
0.001
1
8mer
265932-265947
0.001
0
7mer
89661-89686
0.001
1
6mer
99304-99329
0.001
0
6mer
125317-125341
0.001
2
7mer
141320-141340
0.001
1
6mer
166800-166819
0.001
2
6mer
94522-94549
0.001
1
6mer
52882-52903
0.001
2
6mer
180875-180890
0.001
0
6mer
55421-55444
0.001
0
6mer
235780-235804
0.001
1
6mer
241045-241072
0.001
0
6mer
207770-207785
0.001
0
6mer
182765-182778
0.001
1
6mer
110096-110114
0.001
0
6mer
140451-140477
0.001
0
6mer
66432-66456
0.001
1
6mer
254862-254878
0.001
1
6mer
11422-11439
0.001
0
6mer
144557-144580
0.001
Not Conserved
6mer
222346-222362
0.001
1
6mer
111757-111770
0.001
1
6mer
257864-257888
0.001
3
7mer
148664-148690
0.001
0
6mer
240614-240633
0.001
1
6mer
206629-206648
0.001
0
6mer
165337-165358
0.001
1
6mer
16532-16554
0.001
1
7mer
102682-102703
0.001
1
6mer
132703-132721
0.001
1
6mer
214841-214864
0.001
0
6mer
265888-265909
0.001
0
6mer
68657-68684
0.000
0
6mer
257894-257910
0.000
2
RP13-753N3.1
hsa-miR-199a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584157
Biotype: antisense
Gene id: ENSG00000263531
Gene Name: RP13-753N3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
594-612
0.059
0
7mer
557-576
0.046
0
8mer
414-433
0.046
0
KCNQ1OT1
hsa-miR-199a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
33571-33583
0.009
Not Conserved
7mer
48610-48634
0.006
0
8mer
36666-36690
0.006
0
8mer
40558-40564
0.005
0
9mer
66163-66181
0.005
2
9mer
78168-78191
0.005
0
8mer
11709-11727
0.004
1
7mer
35447-35471
0.004
0
7mer
82392-82405
0.004
0
8mer
68568-68581
0.003
2
8mer
65807-65821
0.003
3
7mer
86166-86190
0.003
1
7mer
88819-88835
0.003
0
7mer
68470-68493
0.003
1
7mer
77131-77147
0.002
0
7mer
47322-47346
0.002
2
7mer
64345-64364
0.002
0
6mer
91012-91027
0.002
1
6mer
55734-55759
0.002
2
7mer
58574-58591
0.002
0
6mer
88662-88686
0.002
1
7mer
55564-55581
0.002
0
7mer
56286-56309
0.002
1
6mer
83628-83651
0.002
1
7mer
59054-59081
0.002
1
6mer
39635-39662
0.002
0
6mer
4789-4805
0.002
1
6mer
64671-64690
0.001
0
6mer
76055-76078
0.001
3
7mer
58509-58519
0.001
1
6mer
43252-43275
0.001
1
6mer
14955-14971
0.001
1
6mer
84270-84295
0.001
1
6mer
85959-85977
0.001
2
7mer
78550-78564
0.001
1
6mer
26603-26611
0.001
0
6mer
75910-75918
0.001
2
6mer
63456-63475
0.001
1
6mer
78347-78371
0.001
1
6mer
57769-57788
0.001
1
6mer
26366-26383
0.001
0
7mer
31911-31933
0.001
Not Conserved
6mer
77937-77954
0.001
1
7mer
66426-66447
0.001
0
6mer
80204-80226
0.001
1
6mer
83443-83460
0.001
2
6mer
62535-62559
0.001
1
6mer
49550-49574
0.001
0
6mer
54837-54864
0.001
0
6mer
31533-31552
0.001
0
6mer
43766-43779
0.001
0
6mer
55458-55475
0.001
1
6mer
31310-31325
0.001
Not Conserved
6mer
62427-62447
0.001
1
6mer
82161-82187
0.001
1
6mer
43699-43725
0.000
1
7mer
36601-36625
0.000
0
XLOC_002216
hsa-miR-199a-5p
0.995
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004342
Biotype: transcript isomorph
Gene id: XLOC_002216
Gene Name: XLOC_002216
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
183-203
0.054
1
7mer
149-176
0.017
1
7mer
347-363
0.016
1
8mer
286-301
0.006
Not Conserved
7mer
244-266
0.005
0
MIR4534
hsa-miR-199a-5p
0.994
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
443-460
0.023
3
7mer
37443-37465
0.005
4
7mer
40556-40579
0.004
2
7mer
24143-24148
0.004
4
6mer
54201-54213
0.004
0
7mer
53115-53135
0.003
0
7mer
32523-32544
0.003
1
6mer
139-163
0.003
0
7mer
20261-20280
0.002
2
7mer
40991-41010
0.002
1
7mer
39553-39570
0.002
0
7mer
23605-23626
0.002
1
7mer
13985-14004
0.002
Not Conserved
7mer
16063-16082
0.002
1
7mer
18446-18459
0.002
0
6mer
15892-15905
0.002
2
7mer
1795-1810
0.002
Not Conserved
6mer
14891-14909
0.002
1
6mer
40154-40158
0.001
1
6mer
8952-8969
0.001
1
7mer
39117-39142
0.001
Not Conserved
6mer
25181-25204
0.001
7
6mer
3638-3655
0.001
0
6mer
25541-25564
0.001
6
6mer
45263-45271
0.001
Not Conserved
6mer
26632-26658
0.001
1
6mer
12749-12767
0.001
Not Conserved
6mer
51796-51820
0.001
4
7mer
42174-42200
0.001
2
6mer
38438-38448
0.001
1
6mer
22963-22987
0.001
0
6mer
11919-11931
0.001
0
6mer
33446-33459
0.001
1
6mer
41367-41383
0.001
1
8mer
36932-36957
0.001
1
6mer
24446-24470
0.001
2
6mer
34294-34318
0.001
2
6mer
36910-36935
0.001
Not Conserved
6mer
5543-5567
0.001
1
6mer
28600-28621
0.001
1
6mer
31874-31898
0.001
1
6mer
22664-22688
0.001
0
6mer
42200-42218
0.000
0
RP11-757G1.6
hsa-miR-199a-5p
0.988
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000512200
Biotype: lincRNA
Gene id: ENSG00000250508
Gene Name: RP11-757G1.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
274-290
0.065
0
6mer
3042-3059
0.013
0
8mer
2447-2472
0.005
Not Conserved
LARGE-AS1
hsa-miR-199a-5p
0.987
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000453336
Biotype: antisense
Gene id: ENSG00000224973
Gene Name: LARGE-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1617-1634
0.043
5
8mer
1591-1597
0.039
7
AC093063.3
hsa-miR-199a-5p
0.987
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000456368
Biotype: lincRNA
Gene id: ENSG00000269460
Gene Name: AC093063.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
191-211
0.082
2
MIR6818
hsa-miR-199a-5p
0.986
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1093-1115
0.012
1
9mer
34509-34535
0.011
6
8mer
38130-38154
0.005
2
7mer
19152-19168
0.004
2
7mer
14042-14069
0.004
1
6mer
48502-48517
0.003
3
7mer
39420-39440
0.003
2
6mer
46755-46780
0.003
8
6mer
12684-12710
0.003
8
7mer
42007-42032
0.003
2
6mer
41147-41170
0.002
6
7mer
25159-25178
0.002
1
6mer
24988-25000
0.002
4
6mer
8200-8214
0.002
1
6mer
15645-15672
0.002
1
6mer
40435-40454
0.002
2
7mer
46246-46267
0.002
1
6mer
2128-2141
0.002
2
6mer
19945-19970
0.001
3
6mer
21097-21105
0.001
0
6mer
42929-42945
0.001
1
6mer
35866-35880
0.001
1
6mer
35347-35371
0.001
2
6mer
4660-4677
0.001
1
6mer
42619-42631
0.001
1
6mer
37284-37299
0.001
0
6mer
3618-3639
0.001
1
6mer
8118-8128
0.001
4
6mer
11869-11884
0.001
0
6mer
37025-37041
0.001
2
6mer
35684-35704
0.001
0
6mer
35324-35347
0.000
2
AC006548.28
hsa-miR-199a-5p
0.985
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
702-722
0.010
0
8mer
18493-18514
0.006
4
8mer
40293-40308
0.004
0
7mer
7514-7528
0.003
2
8mer
10556-10580
0.003
2
7mer
3823-3840
0.002
1
7mer
13800-13817
0.002
1
7mer
82696-82715
0.002
1
7mer
52096-52107
0.002
Not Conserved
7mer
19369-19386
0.002
0
7mer
10188-10208
0.002
0
6mer
67899-67923
0.002
0
7mer
8239-8266
0.002
1
6mer
45251-45260
0.002
1
6mer
65849-65873
0.002
0
6mer
5998-6014
0.001
1
6mer
47307-47315
0.001
Not Conserved
6mer
34179-34196
0.001
1
7mer
18367-18390
0.001
1
6mer
20988-20996
0.001
1
6mer
39556-39580
0.001
1
6mer
81781-81806
0.001
1
6mer
47072-47089
0.001
Not Conserved
6mer
7180-7203
0.001
Not Conserved
6mer
53405-53418
0.001
Not Conserved
7mer
60792-60816
0.001
1
6mer
61464-61485
0.001
0
6mer
74881-74905
0.001
0
7mer
13551-13577
0.001
Not Conserved
6mer
38965-38991
0.001
1
6mer
61958-61975
0.001
0
6mer
16712-16721
0.001
1
6mer
63197-63218
0.001
1
6mer
39390-39410
0.001
2
6mer
59876-59892
0.001
1
6mer
8680-8691
0.001
0
6mer
13953-13979
0.001
0
6mer
51726-51753
0.001
Not Conserved
6mer
15663-15689
0.001
0
6mer
15287-15303
0.001
0
6mer
15214-15238
0.001
0
6mer
80394-80411
0.001
0
6mer
81715-81732
0.001
1
6mer
11974-11999
0.001
0
6mer
3757-3775
0.000
0
6mer
74761-74786
0.000
0
6mer
10528-10546
0.000
0
RP11-856M7.6
hsa-miR-199a-5p
0.983
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584734
Biotype: lincRNA
Gene id: ENSG00000266604
Gene Name: RP11-856M7.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
774-793
0.077
0
RP11-298D21.1
hsa-miR-199a-5p
0.982
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570056
Biotype: antisense
Gene id: ENSG00000260788
Gene Name: RP11-298D21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
84-99
0.076
1
CTD-2050B12.1
hsa-miR-199a-5p
0.981
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565441
Biotype: lincRNA
Gene id: ENSG00000261013
Gene Name: CTD-2050B12.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
267-287
0.058
2
8mer
102-123
0.016
0
XLOC_000648
hsa-miR-199a-5p
0.980
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001360
Biotype: transcript isomorph
Gene id: XLOC_000648
Gene Name: XLOC_000648
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
507-531
0.053
1
6mer
1693-1710
0.017
1
6mer
95-112
0.004
0
KB-7G2.9
hsa-miR-199a-5p
0.978
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000438850
Biotype: lincRNA
Gene id: ENSG00000267338
Gene Name: KB-7G2.9
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
473-487
0.072
0
RP1-5O6.4
hsa-miR-199a-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000454123
Biotype: sense_intronic
Gene id: ENSG00000229955
Gene Name: RP1-5O6.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
56-68
0.072
0
RP11-468E2.5
hsa-miR-199a-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000558478
Biotype: lincRNA
Gene id: ENSG00000259321
Gene Name: RP11-468E2.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
252-276
0.072
0
LINC01005
hsa-miR-199a-5p
0.977
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000441691
Biotype: antisense
Gene id: ENSG00000228564
Gene Name: LINC01005
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
295-321
0.021
1
6mer
465-481
0.016
1
6mer
184-207
0.015
1
6mer
114-139
0.013
1
6mer
222-246
0.007
0
CTB-51A17.1
hsa-miR-199a-5p
0.974
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000503244
Biotype: antisense
Gene id: ENSG00000251423
Gene Name: CTB-51A17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
40-52
0.037
1
8mer
2-28
0.034
1
MUC19
hsa-miR-199a-5p
0.974
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000454784
Biotype: processed_transcript
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-199a-5p
Sequence: cccaguguucagacuaccuguuc
MirBase ID: MIMAT0000231
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
23422-23448
0.007
1
7mer
885-897
0.006
0
7mer
5022-5038
0.005
3
7mer
18502-18529
0.003
0
6mer
23699-23723
0.003
1
6mer
6984-6999
0.002
2
7mer
19358-19384
0.002
1
7mer
22058-22085
0.002
Not Conserved
7mer
22856-22880
0.002
1
7mer
19630-19656
0.002
1
7mer
23180-23202
0.002
0
6mer
8501-8523
0.002
1
7mer
20273-20285
0.002
0
6mer
18723-18735
0.001
2
6mer
7811-7833
0.001
2
6mer
5597-5618
0.001
1
6mer
7367-7389
0.001
0
6mer
20139-20157
0.001
3
6mer
18128-18141
0.001
0
6mer
22293-22311
0.001
1
6mer
8715-8730
0.001
1
6mer
10748-10770
0.001
Not Conserved
6mer
20790-20808
0.001
1
6mer
8916-8937
0.001
1
6mer
16661-16687
0.001
Not Conserved
6mer
22989-23006
0.001
1
6mer
21759-21777
0.001
1
6mer
20436-20454
0.001
Not Conserved
6mer
23510-23528
0.001
2
6mer
5795-5820
0.001
1
6mer
22629-22652
0.001
1
6mer
12169-12195
0.001
Not Conserved
7mer
20152-20178
0.001
2
6mer
13094-13120
0.001
Not Conserved
6mer
13234-13249
0.001
Not Conserved
6mer
12302-12324
0.001
Not Conserved
6mer
7544-7566
0.001
0
6mer
23525-23547
0.001
1
6mer
5199-5225
0.001
1
6mer
18777-18790
0.001
1
6mer
10755-10779
0.000
Not Conserved
7mer
5811-5828
0.000
0
6mer
12310-12333
0.000
Not Conserved
6mer
13235-13258
0.000
Not Conserved
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